Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917820.1_cds_XP_016467377.1_60130
CDS Infomation

[gene=LOC107790004] [db_xref=GeneID:107790004] [protein=uncharacterized protein LOC107790004] [protein_id=XP_016467377.1] [location=complement(join(100274..101003,102204..102427,102899..103110,103716..104850))] [gbkey=CDS]
Sequence

ATGGGATGTTCTTCATCCAAGTTGGATGATGAAGAGGCCGTTCAACTTTGTAAAGATCGA
AAGAAGTTCATTAAACAAGCAGTGGAACAGAGATTGCGATTTGCTTCTGGACATATGGCT
TATGTTCTTGCCATGGAAAGAATTTCTGCAGCCCTTAAAGATTATGTTGACGTCGATGAG
CCTCGCGAGTTTTTATTGGATTCGTTTAAAACTCCACCACCCTTTACTCCTATTAAGAAA
GTAAGTCCAGGTTTCATCTCCATAGAACCAAAATCCTTTTCCATAACACCGTTGAAGTCT
GAACCCAAAACCAAATCCTCTATAAAAATAAATTATCTTAGGTCAGGTGGGAACCCTGCT
GTTTCTGTTGAAGAAAGACCTCAGTCACCCGAAACAGTCAGAATTCAGGCTTACTCCCCA
GTTCATCAATATGGGATGGATAGTTTCTTTTCTATGCAATCCTCACCAATGAACTCTTCG
TTTTTTCAGCATTCCCCCAACAATAGACCTAACTTTCCTCCCCCTTCGCCACAAACATCA
CAATGGGATTTTTTCTGGAACCCATTTTCTTCATTAGATTATTATGGTTATCCTATGAGA
AACAGTATTGAGCAGACAATTCTCGACAATGACAATGATGGGCTAAGGCTAGTTAGAGAG
CAAGAAGGAATTCCTGAATTAGAAGAGGAAACGGAGGTAGAAGAGACCGATCATGGAGAG
GATGTGAAAGAGGAGAGGACCAAAATCCGTCACAATTTTGATAAAGATGAAGTTGTGGTG
GAAGATGTCGACGACGATGATGATGATGATAGCGATGAGGAAGAAATGGATGATGAACAC
GAAAATGTTCCCCATATTCATGATTTACTATCTAAACCCAACCAAACCACAACAGTCGCA
AAGGCACAGAATGTAGGCCAACTCAGCAATAAAGAGACAGCAGTTGCCGATCCTGAAGCA
AAAGAGGAAACACCTGGATTTACTGTTTATGTTAATAGAAGGCCTACAAGCATGTCAGAA
GTTATTAAGGAACTTGAAAGTCAGTTTATGATTGCTTGTAGTTCTGCTAAAGAGGTGTCA
GCTGTGTTAGAGGCTATCAGAGCTCAGTACTCATTGCAATCGAATGACCTGTCACCCATG
AAAATGTTGAATCCTGTAGCTCTATTTCGCTCAGGGTCATCAAGATCATCCTCGTCAAGA
TTTTTGATTGATCCTTCAACTTTAAGAGATGAGGGTTATCAGAGCAGTAGTGATGTGTCT
GATGAATCCAACATGTTCTCAAGCAGTCATCAATCAACCTTGGACAGATTATATGCTTGG
GAGAAAAAACTATATGATGAAGTCAGGGCAGGTGAGCGTGTCCGGCTAGCGTATGAGAAA
AAGCTGGCACAACTCAGAAATCAAGATGTCAATGGAGCAGATCCGTCGTCTTTGGATAAA
ACAAGAACAGCCATTAGGAATCTGGATACTCAGATAAAGGTCTCAATCCACTCTGTTGAA
TCTATTTCAAGAAGGATTGAAACTTTAAGGGATGAAGAATTGCAGCCTCAGCTCTTAGAA
TTAGTGCAAGGGTTAGGAAGAATGTGGAAGGTTATGGCGGAGTGCCACCAAATGCAGAAG
CATACTCTAGATGAAGCCAAGCTCTTACTCGCTGGAACACCTTCGAAGAAGTCCGGCATG
AGGAAGTACACGGTCATGTCACCTTCTGAGGCTCATAGGCTAGCCCGTTCTGCTGCTAAC
CTTGAGATGGAGCTGAGAAACTGGAGAGCCTGTTTCGAGTCATGGATCGTTTCTCAACGA
TCATACTTGCATGCTTTAGCAGGCTGGCTTTTACGATGTACTCGTTCAGATTCTGACACA
TCAAAATCACCCTTGTCTCCTCCTCGTTCCACGGGAGCTCCACCAATATTCAGCATTTGC
ATCCAATGGTCCAGATTATTGGACTCCATCCGGGAGGCAACAGTACTTGAAGGACTAGAT
TTTTTTGCAGCAGGAGTAGGCTCACTCTATGCACAACAACTAAAGGAAGATTCCCGCCGG
ACTCCTGGTGGGTCAAAGAGTTTTGGCACGGAATCTTTTGGGAGTATGGAGGTTGTGGAA
GCTGGGCAACATGACGAGGAAACAATGACAGCAGAAAAGATGGCAGAGGTTGCCATTCGA
GTGCTATGTGCCGGAATGTCAGTTGCTGTGAGCTCACTGACAGAGTTTGCCGTAGCTTCA
GCTGATGGATATGCTGATTTGCTAAAGAACTATGAGAATACCAAGCAGCCACAACAGCAT
TTGAACCAAAATGCGGCGTAA

Peptide Sequence

PEP ID

XP_016467377.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107790004 [Nicotiana tabacum]
Sequence

MGCSSSKLDDEEAVQLCKDRKKFIKQAVEQRLRFASGHMAYVLAMERISAALKDYVDVDE
PREFLLDSFKTPPPFTPIKKVSPGFISIEPKSFSITPLKSEPKTKSSIKINYLRSGGNPA
VSVEERPQSPETVRIQAYSPVHQYGMDSFFSMQSSPMNSSFFQHSPNNRPNFPPPSPQTS
QWDFFWNPFSSLDYYGYPMRNSIEQTILDNDNDGLRLVREQEGIPELEEETEVEETDHGE
DVKEERTKIRHNFDKDEVVVEDVDDDDDDDSDEEEMDDEHENVPHIHDLLSKPNQTTTVA
KAQNVGQLSNKETAVADPEAKEETPGFTVYVNRRPTSMSEVIKELESQFMIACSSAKEVS
AVLEAIRAQYSLQSNDLSPMKMLNPVALFRSGSSRSSSSRFLIDPSTLRDEGYQSSSDVS
DESNMFSSSHQSTLDRLYAWEKKLYDEVRAGERVRLAYEKKLAQLRNQDVNGADPSSLDK
TRTAIRNLDTQIKVSIHSVESISRRIETLRDEELQPQLLELVQGLGRMWKVMAECHQMQK
HTLDEAKLLLAGTPSKKSGMRKYTVMSPSEAHRLARSAANLEMELRNWRACFESWIVSQR
SYLHALAGWLLRCTRSDSDTSKSPLSPPRSTGAPPIFSICIQWSRLLDSIREATVLEGLD
FFAAGVGSLYAQQLKEDSRRTPGGSKSFGTESFGSMEVVEAGQHDEETMTAEKMAEVAIR
VLCAGMSVAVSSLTEFAVASADGYADLLKNYENTKQPQQHLNQNAA

Transcript Sequence

Gene sequence data has not been registered.